💾 Installation

System

pip install ngff-zarr

Browser via Pyodide

With, for example, the Pyodide REPL or JupyterLite

import micropip
await micropip.install('ngff-zarr')

Optional dependencies

Optional extras dependencies include:

cli : Additional IO libraries for file conversion programmically or via the command line interface (CLI).

dask-image : Support multiscale generation with dask-image methods.

itk : Support multiscale generation with itk methods.

tensorstore : Support writing with tensorstore.

validate : Support OME-Zarr data model metadata validation when reading.

Install all optional dependencies

To install all optional dependencies:

pip install "ngff-zarr[cli,dask-image,itk,tensorstore,validate]"

which is equivalent to:

pip install "ngff-zarr[all]"