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ngff-zarr
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ngff-zarr
  • ⚡ Quick start
  • 💾 Installation
  • 🐍 Python Interface
  • 🦕 TypeScript / JavaScript Interface
  • 👨‍💻 Command Line Interface
  • 🤖 MCP Server
  • 🧬 High Content Screening (HCS) Support
  • Leica Image Format (LIF) Support
  • ✨ Specification Features
  • ⚕️ Insight Toolkit (ITK)
  • 🔖 Methods
  • 🤔 Frequently Asked Questions (FAQ)
  • 🔨 Development

📖 Reference

  • API Reference
    • ngff_zarr
      • ngff_zarr.methods
        • ngff_zarr.methods._dask_image
        • ngff_zarr.methods._itk
        • ngff_zarr.methods._itkwasm
        • ngff_zarr.methods._support
        • ngff_zarr.methods._metadata
      • ngff_zarr.v05
        • ngff_zarr.v05.zarr_metadata
      • ngff_zarr.v04
        • ngff_zarr.v04.zarr_metadata
      • ngff_zarr.to_ngff_image
      • ngff_zarr.validate
      • ngff_zarr.task_count
      • ngff_zarr.nibabel_image_to_ngff_image
      • ngff_zarr.to_multiscales
      • ngff_zarr.hcs
      • ngff_zarr.detect_cli_io_backend
      • ngff_zarr.multiscales
      • ngff_zarr.to_ngff_zarr
      • ngff_zarr.cli
      • ngff_zarr.ngff_image_to_itk_image
      • ngff_zarr.from_ngff_zarr
      • ngff_zarr.memory_usage
      • ngff_zarr.rfc4_validation
      • ngff_zarr.rfc4
      • ngff_zarr.lif_to_ngff_image
      • ngff_zarr._zarr_kwargs
      • ngff_zarr._zarr_types
      • ngff_zarr.itk_image_to_ngff_image
      • ngff_zarr._supported_versions
      • ngff_zarr._array_split
      • ngff_zarr.cli_input_to_ngff_image
      • ngff_zarr._zarr_open_array
      • ngff_zarr.parse_metadata
      • ngff_zarr.rfc9_zip
      • ngff_zarr.config
      • ngff_zarr.ngff_image
      • ngff_zarr.zarr_metadata
      • ngff_zarr.rich_dask_progress
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ngff_zarr.cli¶

Module Contents¶

Functions¶

_multiscales_to_ngff_zarr

_ngff_image_to_multiscales

main

API¶

ngff_zarr.cli._multiscales_to_ngff_zarr(
live,
args,
output_store,
rich_dask_progress,
multiscales,
chunks_per_shard=None,
)¶
ngff_zarr.cli._ngff_image_to_multiscales(
live,
ngff_image,
args,
progress,
rich_dask_progress,
subtitle,
method,
)¶
ngff_zarr.cli.main()¶
Next
ngff_zarr.ngff_image_to_itk_image
Previous
ngff_zarr.to_ngff_zarr
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On this page
  • ngff_zarr.cli
    • Module Contents
      • Functions
      • API
        • _multiscales_to_ngff_zarr()
        • _ngff_image_to_multiscales()
        • main()